Class HammingDistance

  • All Implemented Interfaces:
    EditDistance<java.lang.Integer>, SimilarityScore<java.lang.Integer>

    public class HammingDistance
    extends java.lang.Object
    implements EditDistance<java.lang.Integer>
    The hamming distance between two strings of equal length is the number of positions at which the corresponding symbols are different.

    For further explanation about the Hamming Distance, take a look at its Wikipedia page at http://en.wikipedia.org/wiki/Hamming_distance.

    Since:
    1.0
    • Constructor Summary

      Constructors 
      Constructor Description
      HammingDistance()  
    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      java.lang.Integer apply​(java.lang.CharSequence left, java.lang.CharSequence right)
      Find the Hamming Distance between two strings with the same length.
      • Methods inherited from class java.lang.Object

        equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
    • Constructor Detail

      • HammingDistance

        public HammingDistance()
    • Method Detail

      • apply

        public java.lang.Integer apply​(java.lang.CharSequence left,
                                       java.lang.CharSequence right)
        Find the Hamming Distance between two strings with the same length.

        The distance starts with zero, and for each occurrence of a different character in either String, it increments the distance by 1, and finally return its value.

        Since the Hamming Distance can only be calculated between strings of equal length, input of different lengths will throw IllegalArgumentException

         distance.apply("", "")               = 0
         distance.apply("pappa", "pappa")     = 0
         distance.apply("1011101", "1011111") = 1
         distance.apply("ATCG", "ACCC")       = 2
         distance.apply("karolin", "kerstin"  = 3
         
        Specified by:
        apply in interface EditDistance<java.lang.Integer>
        Specified by:
        apply in interface SimilarityScore<java.lang.Integer>
        Parameters:
        left - the first CharSequence, must not be null
        right - the second CharSequence, must not be null
        Returns:
        distance
        Throws:
        java.lang.IllegalArgumentException - if either input is null or if they do not have the same length